Tools Software and data

AnnoTree

Visualization of genomic annotations across the tree of life

Go

DiffBase

A bioinformatic database and phylogenetic classification of C. difficile toxins

Go

PhyloCorrelate

Statistical detection of co-occurring genes across the bacterial phylogeny

Go

MetAnnotate

Taxonomic profiling of metagenomes using custom protein families

Go

MetAnnotate scripts

Extra scripts for processing and visualization of metAnnotate output

Go

PygenProp

A python library for programmatic usage of EBI InterPro Genome Properties

Go

MimicMe

Prediction of host-like proteins in pathogen genomes

[Offline]

OrfanDB

Predicted ORFans in soil, marine, and gut metagenomes

Go

cbsPredict

Prediction of glycan-binding sites in protein structures

Go

AFPredictor

Structure-based prediction of ice-binding sites in antifreeze proteins

Go

Flagellinolysin-DB

A dataset of predicted flagellinolysin genes

Go

EvoClust3D

3D clustering of mutations in protein structures

Go